Mass2Motif: motif_255

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Mass2Motif Annotation

The following are the full annotation and the short annotation (used for network visualisation) assigned to this Mass2Motif.

Annotation: DSF (PE or JE Group C)

Short Annotation: 353, 293, 311, 265, 354, 275, 283, 371, 247, 335

Mass2Motif Details

The following table shows the fragment and loss features that are explained by this Mass2Motifs and their corresponding probabilities. After thresholding to save the model, the total probability left in this motif is 0.9318983401683343. The column MAGMa Substructure Annotation shows substructures and the counts of MAGMa annotations for documents linked above threshold to this motif in this experiment. Hovering over each MAGMa substructure shows a plot of the substructure.

Feature Probability MAGMA Substructure Annotation
fragment_353.1725 0.249
fragment_293.1525 0.174
fragment_311.1625 0.093
fragment_265.1575 0.066
fragment_354.1775 0.028
fragment_275.1425 0.024
fragment_283.1675 0.020
fragment_371.1825 0.017
fragment_247.1475 0.016
fragment_335.1625 0.014
fragment_237.1275 0.013
fragment_251.1425 0.013
fragment_294.1525 0.011
fragment_195.1175 0.011
fragment_431.2025 0.009
fragment_223.1475 0.009
fragment_354.1725 0.006
fragment_312.1675 0.006
fragment_294.1575 0.006
fragment_325.1775 0.006
fragment_269.1525 0.006
fragment_237.1625 0.005
fragment_266.1625 0.005
fragment_223.1125 0.005
fragment_329.1725 0.005
fragment_241.1225 0.005
fragment_415.1875 0.004
fragment_187.1125 0.004
fragment_255.1375 0.004
fragment_413.1925 0.004
fragment_475.2075 0.004
fragment_297.1475 0.004
loss_155.0825 0.004
fragment_312.1625 0.004
fragment_209.1325 0.004
fragment_253.1225 0.003
loss_197.0925 0.003
fragment_269.1125 0.003
fragment_473.2175 0.003
fragment_297.1425 0.003
loss_157.0775 0.003
fragment_249.1275 0.002
fragment_227.1425 0.002
fragment_213.1275 0.002
fragment_419.1825 0.002
fragment_307.1675 0.002
fragment_211.1075 0.002
fragment_397.1775 0.002
fragment_387.1925 0.002
loss_95.0625 0.002
fragment_251.1075 0.002
fragment_415.1925 0.002
fragment_241.1575 0.002
fragment_171.1175 0.002
fragment_266.1575 0.002
fragment_229.1225 0.002
fragment_372.1875 0.002
fragment_251.1025 0.002
fragment_260.1175 0.002
fragment_267.1375 0.002
fragment_225.1275 0.001
fragment_531.2675 0.001
fragment_473.2125 0.001
fragment_453.2225 0.001
fragment_199.1075 0.001
fragment_284.1725 0.001
fragment_397.1975 0.001
fragment_249.1625 0.001
fragment_235.1075 0.001
fragment_275.1375 0.001
fragment_207.1175 0.001
fragment_223.1075 0.001
fragment_250.1375 0.001
fragment_221.1325 0.001
loss_135.0925 0.001
fragment_231.1375 0.001
fragment_163.0725 0.001

Counts of Mass2Motif Features

Two bar plots will appear below this message. The first shows the proportion of the total intensity of these features explained by this Mass2Motif. Red bars show the total intensity (across the whole dataset), blue bars show the proportion explained by the selected Mass2Motif. The second shows the number of times each feature in this Mass2Motif appears in the documents associated with this Mass2Motif.

Fragmentation Spectra Explained by Mass2Motif

The following table lists all fragmentation spectra that are explained by this Mass2Motif at the threshold specified in the experiment option.

Fragmentation spectra Precursor Mass Parent mass Annotation Probability Overlap Score
document_3959 640.3454 640.3454 None 1.000 0.817
document_4486 683.3531 683.3531 None 0.982 0.278
document_3555 608.3066 608.3066 None 0.856 0.783
document_3830 630.2932 630.2932 None 0.810 0.868
document_3601 612.2805 612.2805 None 0.710 0.795
document_2560 531.2720 531.2720 None 0.697 0.489
document_4299 666.3614 666.3614 None 0.659 0.740
document_3960 640.3460 640.3460 None 0.560 0.617
document_4315 668.3408 668.3408 None 0.536 0.778
document_3976 641.2936 641.2936 None 0.460 0.712
document_2298 513.2471 513.2471 None 0.434 0.696
document_2785 548.2839 548.2839 None 0.332 0.801
document_2818 550.2990 550.2990 None 0.317 0.792
document_2657 537.2247 537.2247 None 0.297 0.334
document_2744 545.2858 545.2858 None 0.261 0.292
document_2440 521.2858 521.2858 None 0.248 0.255
document_2771 547.3029 547.3029 None 0.222 0.263
document_5145 794.3375 794.3375 None 0.197 0.737
document_4159 655.2653 655.2653 None 0.190 0.764
document_5144 794.3367 794.3367 None 0.145 0.653
document_4957 754.3621 754.3621 None 0.142 0.805
document_4397 675.2782 675.2782 None 0.141 0.713
document_4715 712.3533 712.3533 None 0.139 0.606
document_4819 730.3070 730.3070 None 0.127 0.734
document_4945 752.3273 752.3273 None 0.121 0.809
document_2639 536.2840 536.2840 None 0.115 0.720
document_4859 736.3087 736.3087 None 0.112 0.695
document_4795 726.3702 726.3702 None 0.106 0.663
document_4333 670.3073 670.3073 None 0.104 0.827
document_4539 689.2988 689.2988 None 0.103 0.729
document_4794 726.3313 726.3313 None 0.098 0.766
document_4332 670.2918 670.2918 None 0.098 0.787
document_3531 606.3265 606.3265 None 0.090 0.762
document_4547 690.3128 690.3128 None 0.089 0.745
document_3309 589.3022 589.3022 None 0.088 0.768
document_3078 570.2690 570.2690 None 0.085 0.658
document_904 427.2109 427.2109 None 0.084 0.784
document_968 431.2053 431.2053 None 0.083 0.672
document_4227 659.2885 659.2885 None 0.083 0.621
document_4713 712.3157 712.3157 None 0.082 0.805
document_4877 740.3833 740.3833 None 0.082 0.471
document_3142 575.2845 575.2845 None 0.077 0.774
document_4876 740.3459 740.3459 None 0.076 0.791
document_3326 590.2957 590.2957 None 0.063 0.310
document_249 353.1740 353.1740 None 0.061 0.737
document_2243 508.2527 508.2527 None 0.061 0.744
document_5058 776.3101 776.3101 None 0.057 0.708
document_3991 642.3036 642.3036 None 0.056 0.476
document_2559 531.2587 531.2587 None 0.056 0.717
document_4837 733.3339 733.3339 None 0.056 0.463
document_4543 690.3109 690.3109 None 0.055 0.853
document_4607 698.3358 698.3358 None 0.055 0.737
document_4830 732.3234 732.3234 None 0.053 0.816
document_1586 471.2375 471.2375 None 0.051 0.745
document_5147 794.3383 794.3383 None 0.050 0.813

Fragmentation Spectra Plot

The fragmentation spectra of molecules explained by this Mass2Motif are plotted below. Features (fragments and losses) explained by this Mass2Motif will be coloured red, while parent ion is coloured in blue. Click Next and Previous to cycle through the fragmentation spectra.