Mass2Motif: motif_328

Return to experiment GlobalEuphorbiaStudy

Mass2Motif Annotation

The following are the full annotation and the short annotation (used for network visualisation) assigned to this Mass2Motif.

Annotation: Tig fragment (83) and others

Short Annotation: Tig fragment (83) and others

Mass2Motif Details

The following table shows the fragment and loss features that are explained by this Mass2Motifs and their corresponding probabilities. After thresholding to save the model, the total probability left in this motif is 0.9622022380293752. The column MAGMa Substructure Annotation shows substructures and the counts of MAGMa annotations for documents linked above threshold to this motif in this experiment. Hovering over each MAGMa substructure shows a plot of the substructure.

Feature Probability MAGMA Substructure Annotation
loss_177.0975 0.312
loss_195.1125 0.212
loss_176.0975 0.041
fragment_295.1675 0.031
loss_177.1025 0.030
loss_194.1075 0.028
loss_135.0875 0.023
fragment_83.0475 0.019
fragment_377.2125 0.019
fragment_395.2225 0.014
fragment_373.2025 0.013
fragment_473.2475 0.013
fragment_395.2175 0.012
fragment_267.1725 0.010
fragment_303.1225 0.009
fragment_253.1175 0.008
fragment_139.1125 0.008
fragment_239.1775 0.008
loss_117.0775 0.007
fragment_455.2425 0.007
loss_135.0925 0.006
fragment_473.2525 0.006
fragment_171.0775 0.006
fragment_211.1075 0.005
loss_95.0625 0.005
fragment_490.2775 0.005
loss_187.1575 0.005
loss_34.9275 0.004
fragment_215.1425 0.004
fragment_163.1075 0.004
fragment_296.1725 0.004
fragment_235.1075 0.004
fragment_239.1025 0.003
fragment_191.1025 0.003
fragment_268.1775 0.003
fragment_314.1825 0.003
fragment_209.1325 0.003
fragment_474.2525 0.003
fragment_313.7575 0.003
loss_176.5225 0.003
fragment_157.0625 0.003
fragment_207.1125 0.003
loss_16.9175 0.003
fragment_413.2275 0.003
loss_50.9225 0.003
fragment_285.1875 0.002
fragment_277.1575 0.002
fragment_490.3675 0.002
fragment_396.2225 0.002
fragment_157.1025 0.002
fragment_237.1275 0.002
fragment_285.1825 0.002
loss_16.9225 0.002
fragment_271.1325 0.002
fragment_217.0875 0.002
loss_134.0875 0.002
fragment_278.1625 0.002
fragment_489.3575 0.002
fragment_378.2175 0.002
fragment_195.1175 0.001
loss_52.9425 0.001
fragment_249.1625 0.001
fragment_169.1025 0.001
fragment_237.1575 0.001
fragment_197.1325 0.001
fragment_255.1375 0.001
loss_153.0975 0.001
fragment_239.1375 0.001
fragment_107.0825 0.001
fragment_105.0675 0.001
loss_18.9275 0.001
fragment_471.3525 0.001
fragment_240.1825 0.001
loss_52.9375 0.001
fragment_217.0825 0.001
loss_112.0625 0.001

Counts of Mass2Motif Features

Two bar plots will appear below this message. The first shows the proportion of the total intensity of these features explained by this Mass2Motif. Red bars show the total intensity (across the whole dataset), blue bars show the proportion explained by the selected Mass2Motif. The second shows the number of times each feature in this Mass2Motif appears in the documents associated with this Mass2Motif.

Fragmentation Spectra Explained by Mass2Motif

The following table lists all fragmentation spectra that are explained by this Mass2Motif at the threshold specified in the experiment option.

Fragmentation spectra Precursor Mass Parent mass Annotation Probability Overlap Score
document_1961 490.2789 490.2789 None 0.529 0.540
document_1964 490.2797 490.2797 None 0.525 0.761
document_1963 490.2792 490.2792 None 0.513 0.815
document_2245 508.2891 508.2891 None 0.324 0.476
document_1960 490.2784 490.2784 None 0.299 0.773
document_1959 490.2783 490.2783 None 0.201 0.562
document_2581 532.2889 532.2889 None 0.166 0.555
document_3324 590.2933 590.2933 None 0.144 0.356
document_3107 572.3211 572.3211 None 0.113 0.652
document_3602 612.3149 612.3149 None 0.110 0.696
document_2785 548.2839 548.2839 None 0.090 0.686
document_2579 532.2887 532.2887 None 0.082 0.354
document_2449 522.2682 522.2682 None 0.075 0.738
document_3301 588.3171 588.3171 None 0.055 0.323
document_4509 686.3153 686.3153 None 0.051 0.631

Fragmentation Spectra Plot

The fragmentation spectra of molecules explained by this Mass2Motif are plotted below. Features (fragments and losses) explained by this Mass2Motif will be coloured red, while parent ion is coloured in blue. Click Next and Previous to cycle through the fragmentation spectra.