Mass2Motif: motif_477

Return to experiment GlobalEuphorbiaStudy

Mass2Motif Annotation

The following are the full annotation and the short annotation (used for network visualisation) assigned to this Mass2Motif.

Annotation: Unknown

Short Annotation: 487, 207, 538, 109, 469, loss 51, loss 69, loss 50, loss 93, loss 34

Mass2Motif Details

The following table shows the fragment and loss features that are explained by this Mass2Motifs and their corresponding probabilities. After thresholding to save the model, the total probability left in this motif is 0.8933474076291515. The column MAGMa Substructure Annotation shows substructures and the counts of MAGMa annotations for documents linked above threshold to this motif in this experiment. Hovering over each MAGMa substructure shows a plot of the substructure.

Feature Probability MAGMA Substructure Annotation
loss_51.0375 0.225
loss_69.0475 0.065
fragment_487.3325 0.041
loss_50.0325 0.025
fragment_207.1725 0.025
fragment_538.3625 0.020
fragment_109.0975 0.018
fragment_469.3225 0.018
loss_93.0825 0.017
loss_34.0225 0.014
fragment_476.3875 0.013
fragment_397.3025 0.012
loss_50.0375 0.012
fragment_493.3875 0.012
loss_87.0575 0.011
loss_111.0925 0.009
loss_53.0525 0.009
fragment_621.3075 0.007
loss_68.0475 0.007
loss_35.0475 0.007
fragment_121.0975 0.007
fragment_488.3325 0.007
fragment_135.1125 0.007
fragment_379.2925 0.007
fragment_133.0975 0.006
fragment_189.1575 0.006
fragment_473.3525 0.006
fragment_451.3125 0.005
loss_71.0625 0.005
fragment_147.1125 0.005
fragment_119.0825 0.005
fragment_175.1475 0.005
fragment_503.3275 0.005
fragment_107.0825 0.005
fragment_197.1925 0.004
loss_68.0425 0.004
fragment_490.3775 0.004
fragment_437.3325 0.004
loss_71.0525 0.004
fragment_475.3775 0.004
fragment_189.1225 0.004
loss_17.0325 0.004
fragment_187.1425 0.004
fragment_263.1575 0.004
fragment_539.3675 0.004
fragment_215.1775 0.004
fragment_159.1125 0.004
fragment_123.1125 0.004
fragment_203.1375 0.004
fragment_163.1425 0.004
fragment_145.0975 0.003
fragment_163.1075 0.003
fragment_191.1375 0.003
fragment_403.3275 0.003
loss_151.1225 0.003
fragment_95.0825 0.003
fragment_161.1275 0.003
fragment_213.1575 0.003
fragment_97.0625 0.003
fragment_249.1825 0.003
fragment_470.3225 0.003
fragment_494.3975 0.003
loss_161.1475 0.003
fragment_225.1825 0.003
fragment_219.1325 0.003
fragment_193.1575 0.003
fragment_521.3375 0.002
loss_92.0825 0.002
fragment_205.1575 0.002
fragment_398.3075 0.002
fragment_171.1125 0.002
fragment_137.0925 0.002
loss_16.0125 0.002
fragment_149.0925 0.002
fragment_137.1275 0.002
fragment_173.1275 0.002
fragment_235.1625 0.002
fragment_339.2675 0.002
loss_129.1075 0.002
fragment_239.1725 0.002
loss_33.0225 0.002
fragment_161.0925 0.002
fragment_285.2175 0.002
fragment_233.1875 0.002
fragment_477.3875 0.002
fragment_139.1075 0.002
fragment_205.1525 0.002
fragment_173.1325 0.002
fragment_167.1425 0.002
fragment_395.2875 0.002
fragment_441.3275 0.002
fragment_229.1925 0.002
loss_70.0475 0.002
loss_97.0425 0.002
fragment_175.1075 0.002
fragment_208.1725 0.002
fragment_149.1275 0.002
fragment_217.1525 0.002
fragment_185.1275 0.002
fragment_179.1025 0.002
fragment_267.2075 0.002
loss_125.1075 0.002
fragment_165.1225 0.002
fragment_135.0775 0.001
fragment_622.3075 0.001
loss_99.0575 0.001
loss_86.0525 0.001
loss_63.0225 0.001
fragment_283.1975 0.001
fragment_489.3425 0.001
fragment_149.1325 0.001
fragment_153.0875 0.001
fragment_125.0925 0.001
fragment_193.1175 0.001
fragment_265.1925 0.001
fragment_433.3025 0.001
fragment_165.0875 0.001
fragment_271.2025 0.001
fragment_315.2275 0.001
fragment_93.0675 0.001
fragment_361.2775 0.001
fragment_241.1875 0.001
fragment_177.1275 0.001
loss_179.1575 0.001
fragment_191.1725 0.001
fragment_173.0925 0.001
fragment_485.3225 0.001
fragment_447.3825 0.001
fragment_243.1675 0.001
fragment_237.1475 0.001
fragment_452.3175 0.001
loss_105.0725 0.001
loss_95.0975 0.001
fragment_491.3775 0.001
fragment_269.1875 0.001
fragment_151.1075 0.001
fragment_251.1725 0.001
fragment_157.0975 0.001
fragment_203.1775 0.001
fragment_423.3125 0.001
loss_115.0575 0.001
loss_181.1725 0.001
fragment_225.1625 0.001
fragment_197.1275 0.001
fragment_195.1025 0.001
fragment_489.3475 0.001
fragment_109.0625 0.001
fragment_333.2375 0.001
fragment_221.1525 0.001
loss_52.0375 0.001
fragment_369.2725 0.001
fragment_123.0775 0.001
fragment_365.2775 0.001

Counts of Mass2Motif Features

Two bar plots will appear below this message. The first shows the proportion of the total intensity of these features explained by this Mass2Motif. Red bars show the total intensity (across the whole dataset), blue bars show the proportion explained by the selected Mass2Motif. The second shows the number of times each feature in this Mass2Motif appears in the documents associated with this Mass2Motif.

Fragmentation Spectra Explained by Mass2Motif

The following table lists all fragmentation spectra that are explained by this Mass2Motif at the threshold specified in the experiment option.

Fragmentation spectra Precursor Mass Parent mass Annotation Probability Overlap Score
document_2676 538.3714 538.3714 None 1.000 0.670
document_3728 621.3046 621.3046 None 0.857 0.029
document_1981 490.3877 490.3877 None 0.592 0.611
document_2276 510.4085 510.4085 None 0.475 0.117
document_2597 532.3981 532.3981 None 0.269 0.468
document_2456 522.3771 522.3771 None 0.267 0.161
document_2186 504.3657 504.3657 None 0.253 0.118
document_2232 506.3816 506.3816 None 0.237 0.547
document_2454 522.3762 522.3762 None 0.192 0.616
document_2537 529.4326 529.4326 None 0.122 0.045
document_2459 522.3778 522.3778 None 0.107 0.493
document_4320 668.4528 668.4528 None 0.094 0.396
document_4564 692.5433 692.5433 None 0.089 0.377
document_2355 516.3670 516.3670 None 0.079 0.297
document_1911 486.4869 486.4869 None 0.063 0.305
document_2251 508.3972 508.3972 None 0.059 0.399
document_1967 490.3524 490.3524 None 0.057 0.156
document_2825 550.4083 550.4083 None 0.056 0.180
document_1435 460.3822 460.3822 None 0.056 0.301
document_4185 656.5067 656.5067 None 0.051 0.088

Fragmentation Spectra Plot

The fragmentation spectra of molecules explained by this Mass2Motif are plotted below. Features (fragments and losses) explained by this Mass2Motif will be coloured red, while parent ion is coloured in blue. Click Next and Previous to cycle through the fragmentation spectra.