Mass2Motif: motif_403

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Mass2Motif Annotation

The following are the full annotation and the short annotation (used for network visualisation) assigned to this Mass2Motif.

Annotation: jatrophane 355, 337, 285, 277, 267 Nic + H20 124, Nic -H20 106

Short Annotation: jatrophane 355, 337, 285, 277, 267 Nic + H20 124, Nic -H20 106

Mass2Motif Details

The following table shows the fragment and loss features that are explained by this Mass2Motifs and their corresponding probabilities. After thresholding to save the model, the total probability left in this motif is 0.7296156630011428. The column MAGMa Substructure Annotation shows substructures and the counts of MAGMa annotations for documents linked above threshold to this motif in this experiment. Hovering over each MAGMa substructure shows a plot of the substructure.

Feature Probability MAGMA Substructure Annotation
fragment_124.0375 0.075
loss_148.0775 0.041
fragment_106.0275 0.028
fragment_468.2375 0.021
fragment_566.2725 0.020
fragment_478.2225 0.018
fragment_418.2025 0.017
fragment_285.1825 0.013
fragment_626.2925 0.013
fragment_686.3175 0.010
fragment_277.1575 0.010
fragment_700.3325 0.010
loss_134.0625 0.010
fragment_714.3475 0.010
fragment_496.2325 0.010
loss_166.0875 0.009
fragment_107.0475 0.009
fragment_249.1625 0.009
loss_79.0475 0.008
fragment_538.2425 0.008
fragment_357.1825 0.007
fragment_171.1175 0.007
fragment_436.2125 0.007
loss_88.0575 0.007
fragment_285.1875 0.007
fragment_548.2625 0.007
fragment_460.2125 0.006
fragment_400.1925 0.006
loss_147.0725 0.006
fragment_296.1725 0.006
fragment_436.2075 0.006
fragment_686.3125 0.006
fragment_267.1725 0.006
loss_190.0875 0.005
fragment_524.2625 0.005
fragment_225.1625 0.005
fragment_337.1775 0.004
fragment_239.1425 0.004
loss_97.0575 0.004
fragment_355.2225 0.004
loss_166.0825 0.004
fragment_461.2525 0.004
loss_176.0725 0.004
fragment_251.1775 0.004
loss_18.0175 0.004
fragment_538.2375 0.003
fragment_173.0975 0.003
fragment_473.3775 0.003
loss_130.0675 0.003
fragment_383.2175 0.003
fragment_567.2775 0.003
fragment_570.2625 0.003
fragment_221.1325 0.003
loss_152.0725 0.003
fragment_253.1575 0.003
fragment_506.2525 0.003
fragment_189.1275 0.003
loss_106.0725 0.003
fragment_133.1025 0.003
loss_74.0375 0.003
fragment_479.2225 0.003
fragment_490.4025 0.003
fragment_450.2275 0.003
fragment_211.1125 0.003
loss_78.0425 0.003
fragment_209.1325 0.003
fragment_241.1925 0.003
loss_106.0675 0.003
fragment_191.1025 0.003
fragment_157.1025 0.003
fragment_608.2825 0.002
loss_79.0525 0.002
fragment_682.3175 0.002
fragment_268.1775 0.002
fragment_159.1175 0.002
loss_176.0775 0.002
fragment_211.1475 0.002
fragment_213.1275 0.002
fragment_387.2525 0.002
fragment_286.1875 0.002
fragment_469.2425 0.002
fragment_594.2625 0.002
fragment_390.2025 0.002
fragment_125.0425 0.002
fragment_552.2575 0.002
fragment_365.2075 0.002
fragment_83.0475 0.002
fragment_390.2075 0.002
fragment_341.2125 0.002
fragment_278.1625 0.002
fragment_197.1325 0.002
fragment_166.0475 0.002
fragment_237.1275 0.002
fragment_183.1175 0.002
fragment_251.1425 0.002
fragment_488.2425 0.002
fragment_715.3525 0.002
fragment_145.1025 0.002
fragment_443.2375 0.002
fragment_408.2175 0.002
fragment_696.3325 0.002
fragment_250.1675 0.002
fragment_239.1825 0.002
fragment_468.2425 0.002
fragment_278.1575 0.002
fragment_143.0875 0.002
fragment_223.1475 0.002
fragment_538.2725 0.002
loss_176.1025 0.002
fragment_187.1125 0.002
fragment_566.2675 0.002
fragment_187.1075 0.002
fragment_314.1375 0.002
loss_194.0875 0.002
fragment_375.1925 0.002
loss_107.0425 0.002
loss_17.9075 0.002
loss_194.0775 0.002
fragment_401.2325 0.002
loss_148.0725 0.002
loss_60.0175 0.002
fragment_185.0975 0.002
fragment_687.3125 0.001
fragment_199.0725 0.001
fragment_584.2825 0.001
fragment_239.1025 0.001
fragment_429.2275 0.001
fragment_163.0775 0.001
fragment_489.2475 0.001
fragment_469.2375 0.001
fragment_173.1275 0.001
fragment_159.1125 0.001
loss_120.0475 0.001
fragment_401.1925 0.001
fragment_225.1225 0.001
fragment_189.0925 0.001
fragment_701.3375 0.001
fragment_309.1825 0.001
fragment_411.2125 0.001
fragment_159.0825 0.001
fragment_612.2825 0.001
fragment_199.0775 0.001
loss_120.0525 0.001
fragment_207.1175 0.001
fragment_626.3025 0.001
loss_176.0675 0.001
fragment_262.1325 0.001
fragment_654.3275 0.001
loss_74.0425 0.001
loss_122.0675 0.001
loss_190.0775 0.001
fragment_105.0325 0.001
fragment_175.1075 0.001
fragment_149.0975 0.001
fragment_427.3175 0.001
loss_33.9325 0.001
fragment_578.2675 0.001
fragment_195.1175 0.001
fragment_373.2025 0.001
fragment_365.2125 0.001
fragment_239.1375 0.001
fragment_235.1475 0.001
loss_162.0925 0.001
fragment_107.0875 0.001
loss_133.0575 0.001
fragment_687.3175 0.001
fragment_627.2925 0.001
loss_88.0525 0.001
fragment_419.1975 0.001
fragment_123.0775 0.001
fragment_454.2175 0.001
loss_184.0925 0.001
fragment_119.0875 0.001
fragment_161.0925 0.001
fragment_327.1925 0.001
loss_165.0825 0.001
fragment_135.0775 0.001
fragment_425.2325 0.001
fragment_356.1825 0.001
loss_147.0775 0.001
fragment_461.2125 0.001
fragment_194.0775 0.001
fragment_309.1875 0.001
fragment_199.1075 0.001
fragment_215.1075 0.001
loss_59.0225 0.001

Counts of Mass2Motif Features

Two bar plots will appear below this message. The first shows the proportion of the total intensity of these features explained by this Mass2Motif. Red bars show the total intensity (across the whole dataset), blue bars show the proportion explained by the selected Mass2Motif. The second shows the number of times each feature in this Mass2Motif appears in the documents associated with this Mass2Motif.

Fragmentation Spectra Explained by Mass2Motif

The following table lists all fragmentation spectra that are explained by this Mass2Motif at the threshold specified in the experiment option.

Fragmentation spectra Precursor Mass Parent mass Annotation Probability Overlap Score
document_4731 714.3489 714.3489 None 0.807 0.532
document_4630 700.3376 700.3376 None 0.788 0.471
document_4629 700.3340 700.3340 None 0.782 0.478
document_4958 754.3792 754.3792 None 0.664 0.184
document_1452 461.2522 461.2522 None 0.657 0.142
document_4511 686.3171 686.3171 None 0.651 0.417
document_4589 695.3511 695.3511 None 0.625 0.001
document_495 392.2231 392.2231 None 0.620 0.044
document_4512 686.3190 686.3190 None 0.574 0.404
document_1987 490.4071 490.4071 None 0.548 0.026
document_4357 672.3381 672.3381 None 0.510 0.367
document_4510 686.3158 686.3158 None 0.497 0.201
document_4448 679.5051 679.5051 None 0.477 0.006
document_3080 570.2700 570.2700 None 0.457 0.257
document_1227 447.2760 447.2760 None 0.432 0.121
document_4966 756.3598 756.3598 None 0.219 0.237
document_4920 748.3330 748.3330 None 0.183 0.298
document_3046 567.2945 567.2945 None 0.174 0.068
document_202 337.2721 337.2721 None 0.150 0.001
document_99 313.1783 313.1783 None 0.097 0.008
document_56 297.1835 297.1835 None 0.070 0.015
document_110 313.1788 313.1788 None 0.064 0.012
document_2948 559.4422 559.4422 None 0.062 0.014
document_7 263.1994 263.1994 None 0.057 0.008
document_3976 641.2936 641.2936 None 0.055 0.060
document_468 387.2160 387.2160 None 0.054 0.125

Fragmentation Spectra Plot

The fragmentation spectra of molecules explained by this Mass2Motif are plotted below. Features (fragments and losses) explained by this Mass2Motif will be coloured red, while parent ion is coloured in blue. Click Next and Previous to cycle through the fragmentation spectra.