Mass2Motif: motif_376

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Mass2Motif Annotation

The following are the full annotation and the short annotation (used for network visualisation) assigned to this Mass2Motif.

Annotation: jatrophane 337, 285, 277 Nic + H20 124, Nic -H20 106

Short Annotation: jatrophane 337, 285, 277 Nic + H20 124, Nic -H20 106

Mass2Motif Details

The following table shows the fragment and loss features that are explained by this Mass2Motifs and their corresponding probabilities. After thresholding to save the model, the total probability left in this motif is 0.8197492977654074. The column MAGMa Substructure Annotation shows substructures and the counts of MAGMa annotations for documents linked above threshold to this motif in this experiment. Hovering over each MAGMa substructure shows a plot of the substructure.

Feature Probability MAGMA Substructure Annotation
fragment_124.0375 0.077
fragment_105.0325 0.062
fragment_762.3125 0.045
fragment_277.1575 0.033
fragment_106.0275 0.020
fragment_249.1625 0.014
fragment_418.2025 0.014
fragment_790.3425 0.014
fragment_763.3175 0.014
fragment_418.1975 0.013
loss_60.0175 0.012
fragment_582.2475 0.011
fragment_436.2125 0.011
fragment_702.2925 0.010
fragment_808.3525 0.010
fragment_600.2575 0.010
fragment_400.1925 0.010
fragment_285.1825 0.010
loss_120.0475 0.010
loss_180.0625 0.009
fragment_530.2525 0.009
fragment_337.1775 0.009
fragment_478.2225 0.008
loss_120.0375 0.008
fragment_748.3275 0.008
fragment_688.3075 0.008
fragment_706.3225 0.007
fragment_506.2525 0.006
fragment_540.2375 0.006
fragment_734.3175 0.006
fragment_524.2625 0.005
fragment_436.2075 0.005
fragment_660.2825 0.005
fragment_399.1925 0.005
loss_182.0525 0.005
fragment_522.2275 0.005
fragment_221.1325 0.005
fragment_566.2725 0.005
fragment_260.1275 0.004
fragment_584.2825 0.004
fragment_296.1725 0.004
fragment_584.2875 0.004
fragment_228.0675 0.004
loss_162.0525 0.004
fragment_748.3325 0.004
fragment_400.1875 0.004
loss_119.0425 0.004
fragment_171.1175 0.004
loss_180.0675 0.004
fragment_791.3475 0.004
fragment_558.2525 0.003
fragment_540.2325 0.003
fragment_460.2075 0.003
loss_182.0625 0.003
fragment_766.3475 0.003
fragment_642.2725 0.003
loss_78.0375 0.003
fragment_628.2875 0.003
fragment_278.1625 0.003
fragment_109.1025 0.003
fragment_730.3175 0.003
loss_59.0225 0.003
fragment_417.2075 0.003
fragment_390.2075 0.003
loss_102.0275 0.003
fragment_125.0425 0.003
loss_190.0475 0.003
fragment_496.2275 0.003
fragment_794.3425 0.003
fragment_454.2225 0.003
fragment_506.2575 0.003
loss_138.0525 0.003
fragment_397.1975 0.003
fragment_239.1425 0.003
fragment_327.1975 0.003
fragment_610.2775 0.003
fragment_646.3025 0.002
fragment_583.2525 0.002
fragment_211.1125 0.002
fragment_417.2025 0.002
fragment_612.2825 0.002
fragment_809.3525 0.002
fragment_512.2425 0.002
fragment_309.1825 0.002
fragment_548.2625 0.002
fragment_749.3325 0.002
fragment_437.2175 0.002
fragment_355.1875 0.002
fragment_689.3125 0.002
fragment_626.2925 0.002
fragment_552.2575 0.002
fragment_253.1575 0.002
fragment_166.0475 0.002
fragment_327.1925 0.002
fragment_209.1325 0.002
fragment_522.2225 0.002
fragment_383.2175 0.002
fragment_558.2475 0.002
fragment_674.2975 0.002
fragment_570.2725 0.002
fragment_408.2175 0.002
fragment_496.2325 0.002
fragment_419.2025 0.002
fragment_415.2125 0.002
fragment_488.2375 0.002
fragment_187.1125 0.002
fragment_688.3125 0.002
fragment_642.2625 0.002
fragment_197.1325 0.002
fragment_707.3275 0.002
fragment_642.2675 0.002
fragment_159.1175 0.002
fragment_572.2625 0.002
fragment_251.1775 0.002
fragment_460.2125 0.002
fragment_670.2975 0.002
fragment_618.2725 0.002
fragment_250.1675 0.002
fragment_235.1475 0.002
loss_198.0775 0.002
fragment_239.1775 0.002
fragment_390.2025 0.002
fragment_399.1975 0.002
loss_130.0275 0.002
fragment_626.3025 0.002
loss_59.0175 0.002
fragment_207.1125 0.002
fragment_776.3275 0.002
fragment_478.2175 0.002
fragment_183.1175 0.002
fragment_225.1625 0.002
fragment_538.2425 0.002
fragment_278.1575 0.001
fragment_730.3225 0.001
fragment_373.1975 0.001
fragment_337.1825 0.001
fragment_259.1425 0.001
fragment_601.2625 0.001
fragment_450.2275 0.001
fragment_567.2775 0.001
fragment_720.3025 0.001
loss_119.0375 0.001
fragment_537.2475 0.001
fragment_235.1125 0.001
fragment_542.2825 0.001
fragment_520.2325 0.001
fragment_159.0825 0.001
fragment_735.3225 0.001
fragment_106.0325 0.001
loss_181.0525 0.001
fragment_401.1975 0.001
fragment_507.2575 0.001
fragment_541.2375 0.001
fragment_703.2875 0.001
fragment_582.2525 0.001
fragment_477.2225 0.001
fragment_660.2775 0.001
loss_179.0625 0.001
fragment_373.2025 0.001
fragment_492.2375 0.001
fragment_119.0875 0.001
fragment_632.2825 0.001
loss_179.0575 0.001
fragment_239.1825 0.001
fragment_262.1375 0.001
fragment_107.0475 0.001
fragment_237.1275 0.001
fragment_228.0625 0.001
fragment_133.1025 0.001
fragment_171.0775 0.001
fragment_199.1125 0.001
fragment_435.2175 0.001
fragment_479.2225 0.001
fragment_211.1475 0.001
fragment_419.1975 0.001
loss_148.0775 0.001
fragment_510.2525 0.001
fragment_643.2725 0.001
fragment_371.1975 0.001
fragment_365.2075 0.001

Counts of Mass2Motif Features

Two bar plots will appear below this message. The first shows the proportion of the total intensity of these features explained by this Mass2Motif. Red bars show the total intensity (across the whole dataset), blue bars show the proportion explained by the selected Mass2Motif. The second shows the number of times each feature in this Mass2Motif appears in the documents associated with this Mass2Motif.

Fragmentation Spectra Explained by Mass2Motif

The following table lists all fragmentation spectra that are explained by this Mass2Motif at the threshold specified in the experiment option.

Fragmentation spectra Precursor Mass Parent mass Annotation Probability Overlap Score
document_4982 762.3100 762.3100 None 0.857 0.543
document_3803 628.2885 628.2885 None 0.834 0.182
document_5116 790.3422 790.3422 None 0.826 0.421
document_5197 808.3529 808.3529 None 0.806 0.481
document_5146 794.3380 794.3380 None 0.778 0.417
document_4770 720.3024 720.3024 None 0.744 0.398
document_5059 776.3272 776.3272 None 0.721 0.344
document_5014 766.3412 766.3412 None 0.672 0.418
document_5360 866.4058 866.4058 None 0.660 0.216
document_4984 762.3120 762.3120 None 0.617 0.486
document_4920 748.3330 748.3330 None 0.508 0.305
document_5196 808.3520 808.3520 None 0.489 0.309
document_5233 820.3536 820.3536 None 0.241 0.348
document_4429 678.2909 678.2909 None 0.164 0.265
document_4756 717.3574 717.3574 None 0.115 0.096
document_5243 822.3684 822.3684 None 0.077 0.338
document_3234 583.2673 583.2673 None 0.069 0.236

Fragmentation Spectra Plot

The fragmentation spectra of molecules explained by this Mass2Motif are plotted below. Features (fragments and losses) explained by this Mass2Motif will be coloured red, while parent ion is coloured in blue. Click Next and Previous to cycle through the fragmentation spectra.