Mass2Motif: motif_64

Return to experiment GlobalEuphorbiaStudy

Mass2Motif Annotation

The following are the full annotation and the short annotation (used for network visualisation) assigned to this Mass2Motif.

Annotation: Nic + H20 124, Nic -H20 106 and others

Short Annotation: Nic + H20 124, Nic -H20 106 and others

Mass2Motif Details

The following table shows the fragment and loss features that are explained by this Mass2Motifs and their corresponding probabilities. After thresholding to save the model, the total probability left in this motif is 0.8781944347051379. The column MAGMa Substructure Annotation shows substructures and the counts of MAGMa annotations for documents linked above threshold to this motif in this experiment. Hovering over each MAGMa substructure shows a plot of the substructure.

Feature Probability MAGMA Substructure Annotation
fragment_124.0375 0.201
fragment_416.1875 0.051
fragment_624.2775 0.035
fragment_106.0275 0.026
fragment_293.1525 0.025
fragment_564.2575 0.022
fragment_265.1575 0.021
fragment_746.3175 0.018
fragment_806.3375 0.017
fragment_434.1925 0.016
fragment_434.1975 0.015
fragment_476.2075 0.014
fragment_508.2325 0.012
fragment_283.1675 0.012
fragment_490.2225 0.012
fragment_311.1625 0.011
fragment_494.2175 0.011
fragment_337.1775 0.010
fragment_638.2975 0.010
loss_190.0875 0.009
fragment_417.1875 0.008
loss_120.0425 0.008
loss_116.0475 0.008
fragment_125.0425 0.008
loss_197.0675 0.008
fragment_388.1875 0.007
fragment_582.2675 0.007
fragment_625.2825 0.007
fragment_416.1825 0.007
loss_59.0175 0.007
loss_183.0525 0.007
fragment_686.2975 0.006
fragment_237.1275 0.006
fragment_275.1425 0.005
fragment_416.1925 0.005
loss_123.0325 0.005
fragment_501.2425 0.005
fragment_747.3225 0.005
fragment_565.2625 0.005
loss_60.0225 0.005
fragment_807.3425 0.005
fragment_386.1725 0.004
fragment_536.2625 0.004
fragment_578.2775 0.004
fragment_388.1925 0.004
fragment_536.2275 0.004
fragment_435.1975 0.004
fragment_415.1925 0.004
fragment_367.1925 0.004
fragment_266.1625 0.003
fragment_207.1175 0.003
fragment_452.2025 0.003
fragment_175.1125 0.003
fragment_448.2075 0.003
fragment_294.1525 0.003
loss_148.0725 0.003
fragment_247.1425 0.003
fragment_353.1775 0.003
fragment_624.2725 0.003
fragment_247.1475 0.003
loss_74.0325 0.003
fragment_406.2025 0.003
fragment_312.1725 0.003
fragment_187.1125 0.002
fragment_173.0925 0.002
fragment_639.2975 0.002
fragment_477.2075 0.002
fragment_385.2025 0.002
fragment_718.2825 0.002
fragment_406.1975 0.002
fragment_387.1925 0.002
fragment_278.1625 0.002
fragment_159.0825 0.002
loss_162.0525 0.002
fragment_211.1075 0.002
fragment_658.2675 0.002
fragment_598.2425 0.002
fragment_494.2125 0.002
fragment_171.0775 0.002
fragment_157.0975 0.002
fragment_197.0925 0.002
fragment_480.2375 0.002
loss_88.0175 0.002
loss_144.0425 0.002
loss_123.0275 0.002
fragment_515.2675 0.002
fragment_356.1925 0.002
fragment_550.2425 0.002
fragment_223.1125 0.002
fragment_228.0675 0.002
fragment_522.2475 0.002
loss_189.0825 0.002
fragment_237.1625 0.002
fragment_491.2225 0.002
fragment_462.2225 0.002
fragment_399.2075 0.002
fragment_495.2175 0.002
fragment_570.2425 0.002
fragment_255.1375 0.002
fragment_687.2975 0.002
fragment_778.3025 0.002
fragment_538.2225 0.002
fragment_338.1825 0.002
fragment_251.1425 0.002
fragment_309.1825 0.002
loss_119.0425 0.002
fragment_165.0925 0.002
fragment_330.1475 0.001
fragment_509.2325 0.001
loss_115.0425 0.001
fragment_398.2025 0.001
loss_164.0525 0.001
loss_78.0275 0.001
loss_130.0675 0.001
fragment_231.1225 0.001
fragment_728.3075 0.001
fragment_642.2875 0.001
fragment_546.2675 0.001
fragment_583.2775 0.001
fragment_209.1325 0.001
fragment_381.2075 0.001
fragment_297.1775 0.001
fragment_504.2425 0.001
fragment_728.3225 0.001
loss_78.0175 0.001
fragment_458.2175 0.001
fragment_442.2275 0.001
loss_88.0125 0.001
fragment_199.1125 0.001
loss_133.0575 0.001
fragment_171.1175 0.001
fragment_195.1175 0.001
fragment_209.0975 0.001
fragment_678.2675 0.001
fragment_397.1925 0.001
fragment_554.2375 0.001
fragment_314.1775 0.001
fragment_228.0625 0.001

Counts of Mass2Motif Features

Two bar plots will appear below this message. The first shows the proportion of the total intensity of these features explained by this Mass2Motif. Red bars show the total intensity (across the whole dataset), blue bars show the proportion explained by the selected Mass2Motif. The second shows the number of times each feature in this Mass2Motif appears in the documents associated with this Mass2Motif.

Fragmentation Spectra Explained by Mass2Motif

The following table lists all fragmentation spectra that are explained by this Mass2Motif at the threshold specified in the experiment option.

Fragmentation spectra Precursor Mass Parent mass Annotation Probability Overlap Score
document_5187 806.3386 806.3386 None 0.772 0.668
document_4428 678.2675 678.2675 None 0.668 0.397
document_5067 778.3060 778.3060 None 0.519 0.458
document_4801 726.5511 726.5511 None 0.407 0.005
document_3750 624.2790 624.2790 None 0.324 0.634
document_3749 624.2780 624.2780 None 0.321 0.465
document_3927 638.2951 638.2951 None 0.280 0.516
document_4703 710.3621 710.3621 None 0.222 0.300
document_4122 652.3103 652.3103 None 0.165 0.419
document_4897 744.3205 744.3205 None 0.161 0.473
document_4492 684.2987 684.2987 None 0.142 0.370
document_4780 722.3089 722.3089 None 0.140 0.409
document_710 412.1848 412.1848 None 0.137 0.511
document_5310 848.3485 848.3485 None 0.127 0.508
document_5165 800.3462 800.3462 None 0.106 0.344
document_490 391.1785 391.1785 None 0.101 0.309
document_5058 776.3101 776.3101 None 0.090 0.403
document_85 311.1623 311.1623 None 0.086 0.034
document_4276 664.3465 664.3465 None 0.085 0.224

Fragmentation Spectra Plot

The fragmentation spectra of molecules explained by this Mass2Motif are plotted below. Features (fragments and losses) explained by this Mass2Motif will be coloured red, while parent ion is coloured in blue. Click Next and Previous to cycle through the fragmentation spectra.