Mass2Motif: motif_162

Return to experiment PhotorhabdusXenorhabdus_LDA_300Mass2Motifs_minMS2Int_25

Mass2Motif Annotation

The following are the full annotation and the short annotation (used for network visualisation) assigned to this Mass2Motif.

Annotation: Szentiamide related Mass2Motif

Short Annotation: Szentiamide related Mass2Motif

Mass2Motif Details

The following table shows the fragment and loss features that are explained by this Mass2Motifs and their corresponding probabilities. After thresholding to save the model, the total probability left in this motif is 0.7931946480810558. The column MAGMa Substructure Annotation shows substructures and the counts of MAGMa annotations for documents linked above threshold to this motif in this experiment. Hovering over each MAGMa substructure shows a plot of the substructure.

Feature Probability MAGMA Substructure Annotation
fragment_372.1925 0.037
fragment_390.2025 0.030
loss_156.1225 0.030
fragment_489.2675 0.026
fragment_860.3925 0.018
fragment_442.3475 0.018
fragment_344.1975 0.014
fragment_489.2725 0.010
fragment_490.2725 0.010
loss_170.1425 0.009
fragment_506.8125 0.009
fragment_404.3025 0.009
fragment_844.4025 0.009
fragment_482.7475 0.009
loss_147.0425 0.009
loss_16.4325 0.009
loss_178.0825 0.009
loss_195.6125 0.009
loss_186.0775 0.009
fragment_822.4175 0.008
fragment_205.0975 0.008
fragment_838.4125 0.007
fragment_471.2575 0.007
loss_172.0375 0.007
fragment_225.1225 0.007
loss_193.0575 0.007
loss_138.0175 0.007
fragment_788.4325 0.007
fragment_404.6375 0.006
loss_127.0975 0.006
loss_58.0475 0.006
fragment_384.2975 0.006
fragment_652.3325 0.005
fragment_429.2125 0.005
fragment_861.3975 0.005
fragment_352.1675 0.005
fragment_483.2525 0.005
fragment_926.5325 0.005
fragment_391.2025 0.005
fragment_243.1325 0.005
fragment_368.1625 0.005
fragment_471.2625 0.005
loss_168.0875 0.005
loss_165.1125 0.005
loss_51.0425 0.005
loss_140.1625 0.004
fragment_267.1925 0.004
fragment_443.3525 0.004
fragment_882.9825 0.004
loss_43.5375 0.004
fragment_839.4175 0.004
loss_171.1275 0.004
fragment_507.3175 0.004
fragment_387.2725 0.004
fragment_926.8725 0.004
fragment_362.2075 0.004
fragment_636.3375 0.004
loss_117.1525 0.004
fragment_391.3025 0.004
loss_12.1225 0.004
fragment_295.0625 0.004
fragment_602.3525 0.004
fragment_318.1825 0.003
fragment_152.0675 0.003
loss_115.0525 0.003
fragment_789.4375 0.003
loss_164.1275 0.003
fragment_555.4275 0.003
fragment_367.1675 0.003
loss_43.0375 0.003
fragment_883.4875 0.003
loss_199.1225 0.003
loss_168.5975 0.003
fragment_254.1575 0.003
fragment_247.1425 0.003
fragment_527.4775 0.003
loss_100.0825 0.003
fragment_826.4425 0.003
fragment_580.3075 0.003
fragment_213.1625 0.003
loss_157.0525 0.003
loss_158.0225 0.003
fragment_472.2625 0.003
fragment_175.1175 0.003
fragment_467.2275 0.003
loss_42.5325 0.003
fragment_883.9875 0.003
fragment_156.0775 0.003
fragment_263.1375 0.003
fragment_288.2025 0.003
fragment_488.3175 0.003
loss_192.1275 0.003
fragment_384.8025 0.003
fragment_373.1925 0.003
fragment_926.1925 0.003
fragment_319.4375 0.003
fragment_307.1825 0.003
loss_185.0725 0.003
fragment_826.9425 0.002
loss_99.5825 0.002
fragment_404.9725 0.002
fragment_794.4225 0.002
fragment_373.1975 0.002
fragment_219.1475 0.002
fragment_344.1475 0.002
fragment_760.4375 0.002
loss_188.1175 0.002
loss_65.0625 0.002
loss_144.1275 0.002
fragment_927.1875 0.002
fragment_307.4025 0.002
fragment_411.2125 0.002
fragment_823.4175 0.002
fragment_576.2825 0.002
loss_164.0675 0.002
loss_14.5125 0.002
loss_107.0925 0.002
fragment_674.3175 0.002
fragment_823.4225 0.002
loss_55.0725 0.002
fragment_570.3275 0.002
fragment_303.6025 0.002
loss_58.4575 0.002
loss_86.9475 0.002
fragment_451.2325 0.002
fragment_653.3375 0.002
fragment_365.2075 0.002
loss_170.0375 0.002
fragment_658.3225 0.002
loss_181.1175 0.002
fragment_668.5175 0.002
fragment_810.4175 0.002
loss_15.4325 0.002
fragment_387.7775 0.002
fragment_318.1775 0.002
loss_155.1225 0.002
fragment_368.1575 0.002
loss_181.5975 0.002
fragment_365.4625 0.002
fragment_581.3225 0.002
loss_190.0575 0.002
loss_139.1625 0.002
fragment_111.0575 0.002
loss_156.0625 0.002
fragment_373.2025 0.002
fragment_637.3425 0.002
fragment_391.8075 0.002
fragment_303.7875 0.002
fragment_101.0675 0.002
fragment_483.7525 0.002
loss_49.9875 0.002
fragment_583.8225 0.002
fragment_927.5275 0.002
fragment_504.7775 0.002
loss_178.1425 0.002
fragment_507.8175 0.002
fragment_97.0825 0.002
loss_190.1325 0.002
fragment_605.8425 0.001
loss_75.0275 0.001
fragment_192.0925 0.001
fragment_398.3025 0.001
fragment_564.3225 0.001
fragment_235.1425 0.001
fragment_353.1675 0.001
fragment_425.5625 0.001
loss_139.0125 0.001
fragment_598.3025 0.001
loss_42.0425 0.001
fragment_583.3325 0.001
fragment_388.2675 0.001
loss_111.6425 0.001
fragment_824.4225 0.001
fragment_581.8275 0.001
fragment_368.7075 0.001
fragment_312.1375 0.001
fragment_171.1425 0.001
loss_57.0425 0.001
fragment_147.0825 0.001
fragment_514.2925 0.001
fragment_862.4025 0.001
fragment_369.1625 0.001
fragment_303.9875 0.001
fragment_795.4275 0.001
fragment_329.2625 0.001
loss_55.0225 0.001
fragment_601.4025 0.001
fragment_582.3175 0.001
fragment_563.3525 0.001
fragment_401.2875 0.001
fragment_307.5825 0.001
fragment_586.3175 0.001
loss_118.9525 0.001
loss_157.1625 0.001
fragment_227.1275 0.001
fragment_584.3125 0.001
fragment_398.6325 0.001
fragment_313.1825 0.001
loss_99.0825 0.001
fragment_827.4425 0.001
fragment_229.1225 0.001
loss_155.1675 0.001
loss_114.1425 0.001
fragment_654.5025 0.001
fragment_511.2525 0.001
fragment_270.1425 0.001
loss_127.0625 0.001
fragment_169.1275 0.001
loss_185.1175 0.001
loss_26.9875 0.001

Counts of Mass2Motif Features

Two bar plots will appear below this message. The first shows the proportion of the total intensity of these features explained by this Mass2Motif. Red bars show the total intensity (across the whole dataset), blue bars show the proportion explained by the selected Mass2Motif. The second shows the number of times each feature in this Mass2Motif appears in the documents associated with this Mass2Motif.

Fragmentation Spectra Explained by Mass2Motif

The following table lists all fragmentation spectra that are explained by this Mass2Motif at the threshold specified in the experiment option.

Fragmentation spectra Precursor Mass Parent mass Annotation Probability Overlap Score
document_5977 926.5240 926.5240 None 1.000 0.085
document_2852 404.3040 404.3040 None 0.975 0.021
document_5838 860.3910 860.3910 None 0.886 0.238
document_5824 856.4200 856.4200 None 0.844 0.153
document_5701 822.4150 822.4150 None 0.807 0.213
document_5585 788.4310 788.4310 None 0.806 0.172
document_5762 839.4420 839.4420 None 0.802 0.201
document_5817 855.4350 855.4350 None 0.782 0.209
document_5758 838.4090 838.4090 None 0.772 0.218
document_2624 384.2890 384.2890 None 0.732 0.077
document_879 267.1200 267.1200 None 0.640 0.053
document_1478 299.2410 299.2410 None 0.547 0.040
document_1583 307.1850 307.1850 None 0.526 0.044
document_4388 581.8160 581.8160 None 0.502 0.038
document_1491 300.2040 300.2040 None 0.498 0.031
document_2732 391.3040 391.3040 None 0.497 0.049
document_1489 300.2030 300.2030 None 0.473 0.038
document_819 263.1720 263.1720 None 0.462 0.052
document_3077 425.7270 425.7270 None 0.426 0.031
document_2101 344.1450 344.1450 None 0.361 0.014
document_5780 844.3960 844.3960 None 0.277 0.172
document_5702 822.4150 822.4150 None 0.226 0.054
document_3957 530.2490 530.2490 None 0.175 0.009
document_5584 788.4300 788.4300 None 0.095 0.092

Fragmentation Spectra Plot

The fragmentation spectra of molecules explained by this Mass2Motif are plotted below. Features (fragments and losses) explained by this Mass2Motif will be coloured red, while parent ion is coloured in blue. Click Next and Previous to cycle through the fragmentation spectra.