Mass2Motif: motif_106

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Mass2Motif Annotation

The following are the full annotation and the short annotation (used for network visualisation) assigned to this Mass2Motif.

Annotation: Streptomyces related motif - 163 fragment based [amino acid related?]

Short Annotation: Streptomyces related motif - 163 fragment based [amino acid related?]

Mass2Motif Details

The following table shows the fragment and loss features that are explained by this Mass2Motifs and their corresponding probabilities. After thresholding to save the model, the total probability left in this motif is 0.9734718467023764. The column MAGMa Substructure Annotation shows substructures and the counts of MAGMa annotations for documents linked above threshold to this motif in this experiment. Hovering over each MAGMa substructure shows a plot of the substructure.

Feature Probability MAGMA Substructure Annotation
fragment_163.0500 0.451
fragment_141.0500 0.165
loss_146.1500 0.052
fragment_281.1500 0.047
fragment_179.1500 0.036
loss_170.1500 0.033
loss_188.1500 0.030
loss_192.1500 0.027
fragment_305.1500 0.027
fragment_287.1500 0.018
loss_144.1500 0.010
fragment_329.1500 0.009
loss_145.1500 0.007
fragment_331.1500 0.005
fragment_134.9500 0.005
fragment_209.1500 0.004
fragment_349.0500 0.004
fragment_363.1500 0.004
fragment_91.9500 0.003
loss_138.6500 0.003
fragment_180.5500 0.003
loss_136.7500 0.003
loss_180.7500 0.003
loss_192.0500 0.002
loss_134.2500 0.002
fragment_395.1500 0.002
fragment_101.0500 0.002
fragment_306.3500 0.002
loss_168.8500 0.002
loss_183.2500 0.002
fragment_103.1500 0.002
fragment_165.9500 0.002
fragment_327.2500 0.001
loss_139.1500 0.001
loss_166.7500 0.001
fragment_234.0500 0.001
fragment_391.3500 0.001

Counts of Classyfire Substituent terms

Term name Count in motif Percentage in motif Percentage in experiment Absolute difference
Hydrocarbon derivative 81 100 100 0
Organooxygen compound 79 97.5 95.3 2.2
Benzenoid 26 32.1 18.3 13.8
Organic nitrogen compound 23 28.4 55.6 27.2
Carbonyl group 22 27.2 44.0 16.9
Organonitrogen compound 20 24.7 54.1 29.4
Organopnictogen compound 17 21.0 45.2 24.3
Organoheterocyclic compound 16 19.8 13.3 6.4
Aromatic heteropolycyclic compound 15 18.5 9.6 8.9
Oxacycle 13 16.0 7.9 8.1
Alcohol 12 14.8 14.7 0.2
Oxane 10 12.3 1.9 10.4
Secondary alcohol 10 12.3 7.7 4.6
Polyol 8 9.9 1.6 8.3
Azacycle 7 8.6 22.6 14.0
Acetal 7 8.6 1.5 7.2
O-glycosyl compound 6 7.4 1.2 6.2
Glycosyl compound 4 4.9 0.7 4.2
Primary alcohol 4 4.9 0.9 4.1
Aliphatic heteropolycyclic compound 3 3.7 0.1 3.6
Heteroaromatic compound 3 3.7 5.8 2.0
1-hydroxy-2-unsubstituted benzenoid 2 2.5 1.3 1.2
Amine 2 2.5 4.4 1.9
Carboxylic acid ester 2 2.5 1.8 0.7
1-benzopyran 1 1.2 0.1 1.1
1-hydroxy-4-unsubstituted benzenoid 1 1.2 0.2 1.0
Cyclic alcohol 1 1.2 0.0 1.2
Vinylogous acid 1 1.2 0.1 1.2
Phenol 1 1.2 0.5 0.8
Aromatic homomonocyclic compound 1 1.2 0.1 1.2

Counts of Mass2Motif Features

Two bar plots will appear below this message. The first shows the proportion of the total intensity of these features explained by this Mass2Motif. Red bars show the total intensity (across the whole dataset), blue bars show the proportion explained by the selected Mass2Motif. The second shows the number of times each feature in this Mass2Motif appears in the documents associated with this Mass2Motif.

Fragmentation Spectra Explained by Mass2Motif

The following table lists all fragmentation spectra that are explained by this Mass2Motif at the threshold specified in the experiment option.

Fragmentation spectra Precursor Mass Parent mass Annotation Probability Overlap Score
document_1742 475.2870 475.2870 None 0.830 0.639
document_1733 473.3440 473.3440 None 0.569 0.493
document_1023 431.2940 431.2940 None 0.478 0.567
document_1725 473.3440 473.3440 None 0.478 0.626
document_1743 475.2870 475.2870 None 0.466 0.571
document_422 417.2760 417.2760 None 0.439 0.529
document_2495 529.4080 529.4080 None 0.428 0.490
document_436 419.8610 419.8610 None 0.424 0.508
document_1002 431.2180 431.2180 None 0.368 0.501
document_1729 473.3440 473.3440 None 0.355 0.168
document_1726 473.3430 473.3430 None 0.351 0.464
document_185 407.2230 407.2230 None 0.331 0.488
document_1730 473.8560 473.8560 None 0.305 0.486
document_184 407.2230 407.2230 None 0.288 0.455
document_1513 459.3290 459.3290 None 0.227 0.550
document_2182 501.3540 501.3540 None 0.206 0.554
document_228 410.2170 410.2170 None 0.204 0.483
document_3673 639.4070 639.4070 None 0.176 0.165
document_3490 629.3460 629.3460 None 0.168 0.451
document_1732 473.3440 473.3440 None 0.165 0.525
document_183 407.2240 407.2240 None 0.165 0.451
document_1748 475.3240 475.3240 None 0.162 0.095
document_5025 735.3310 735.3310 None 0.149 0.165
document_3493 629.3490 629.3490 None 0.145 0.451
document_2450 526.2600 526.2600 None 0.138 0.484
document_2369 517.0910 517.0910 None 0.137 0.165
document_1620 466.4390 466.4390 None 0.133 0.198
document_5551 813.4610 813.4610 None 0.129 0.616
document_3634 639.3570 639.3570 None 0.126 0.165
document_3752 647.3600 647.3600 None 0.124 0.455
document_1297 443.3310 443.3310 None 0.123 0.461
document_1020 432.1920 432.1920 None 0.118 0.165
document_5842 975.5130 975.5130 None 0.115 0.616
document_842 429.3180 429.3180 None 0.115 0.070
document_3183 595.3810 595.3810 None 0.113 0.170
document_1938 489.6890 489.6890 None 0.112 0.165
document_3785 652.1740 652.1740 None 0.111 0.451
document_1830 482.1840 482.1840 None 0.102 0.165
document_1826 482.1830 482.1830 None 0.102 0.166
document_5823 959.5180 959.5180 None 0.102 0.616
document_1823 482.1820 482.1820 None 0.101 0.165
document_3795 654.1060 654.1060 None 0.099 0.165
document_99 402.2130 402.2130 None 0.095 0.059
document_5549 813.4600 813.4600 None 0.095 0.616
document_2311 511.3180 511.3180 None 0.091 0.077
document_2079 498.3280 498.3280 None 0.087 0.165
document_5843 975.5130 975.5130 None 0.086 0.614
document_4289 691.3830 691.3830 None 0.084 0.450
document_5499 797.4660 797.4660 None 0.083 0.616
document_154 407.0110 407.0110 None 0.082 0.459
document_2511 531.3840 531.3840 None 0.081 0.498
document_2782 559.4160 559.4160 None 0.081 0.087
document_1829 482.1830 482.1830 None 0.079 0.164
document_811 429.2420 429.2420 None 0.078 0.455
document_5804 945.5020 945.5020 None 0.076 0.615
document_1825 482.1830 482.1830 None 0.074 0.195
document_1831 482.1840 482.1840 None 0.073 0.165
document_1827 482.1830 482.1830 None 0.072 0.165
document_1832 482.1850 482.1850 None 0.070 0.164
document_4928 730.4760 730.4760 None 0.070 0.450
document_2183 501.3530 501.3530 None 0.067 0.505
document_242 412.1630 412.1630 None 0.066 0.047
document_693 425.1940 425.1940 None 0.066 0.478
document_3463 625.5520 625.5520 None 0.064 0.165
document_398 415.2820 415.2820 None 0.064 0.052
document_157 405.9570 405.9570 None 0.063 0.450
document_3829 661.3590 661.3590 None 0.063 0.459
document_3179 595.3800 595.3800 None 0.062 0.033
document_5825 959.5180 959.5180 None 0.061 0.451
document_3098 589.3900 589.3900 None 0.061 0.082
document_2709 551.3320 551.3320 None 0.061 0.165
document_5921 1269.6060 1269.6060 None 0.060 0.616
document_3383 615.3300 615.3300 None 0.059 0.456
document_485 419.2760 419.2760 None 0.058 0.165
document_3589 638.1450 638.1450 None 0.057 0.451
document_1791 478.4360 478.4360 None 0.055 0.167
document_1067 433.2920 433.2920 None 0.055 0.198
document_2410 522.2110 522.2110 None 0.054 0.451
document_872 430.3870 430.3870 None 0.054 0.165
document_227 410.2150 410.2150 None 0.053 0.453
document_994 430.9130 430.9130 None 0.052 0.455

Fragmentation Spectra Plot

The fragmentation spectra of molecules explained by this Mass2Motif are plotted below. Features (fragments and losses) explained by this Mass2Motif will be coloured red, while parent ion is coloured in blue. Click Next and Previous to cycle through the fragmentation spectra.