Mass2Motif: motif_105

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Mass2Motif Annotation

The following are the full annotation and the short annotation (used for network visualisation) assigned to this Mass2Motif.

Annotation: Streptomyces and one block of species related motif - 293 fragment

Short Annotation: Streptomyces and one block of species related motif - 293 fragment

Mass2Motif Details

The following table shows the fragment and loss features that are explained by this Mass2Motifs and their corresponding probabilities. After thresholding to save the model, the total probability left in this motif is 0.9737206754518429. The column MAGMa Substructure Annotation shows substructures and the counts of MAGMa annotations for documents linked above threshold to this motif in this experiment. Hovering over each MAGMa substructure shows a plot of the substructure.

Feature Probability MAGMA Substructure Annotation
fragment_293.1500 0.421
loss_112.1500 0.138
loss_126.1500 0.082
fragment_294.1500 0.043
loss_39.8500 0.017
fragment_117.1500 0.016
loss_184.2500 0.016
fragment_84.9500 0.015
fragment_360.9500 0.015
loss_39.5500 0.015
fragment_150.9500 0.013
fragment_228.9500 0.011
loss_124.2500 0.008
fragment_465.3500 0.008
loss_171.1500 0.008
loss_78.0500 0.007
loss_178.1500 0.007
fragment_227.0500 0.006
fragment_218.1500 0.006
loss_195.0500 0.005
fragment_341.3500 0.005
fragment_310.1500 0.004
fragment_329.2500 0.004
fragment_359.9500 0.004
loss_115.9500 0.004
fragment_181.0500 0.004
fragment_65.0500 0.004
loss_95.0500 0.004
fragment_395.1500 0.004
loss_121.8500 0.004
fragment_310.6500 0.003
loss_186.6500 0.003
loss_56.1500 0.003
fragment_467.3500 0.003
fragment_153.0500 0.003
loss_110.1500 0.003
fragment_174.0500 0.003
fragment_284.1500 0.003
loss_72.8500 0.003
loss_156.0500 0.003
fragment_290.2500 0.003
fragment_200.7500 0.003
loss_39.1500 0.003
loss_127.1500 0.002
fragment_93.8500 0.002
loss_115.5500 0.002
fragment_75.0500 0.002
loss_114.9500 0.002
fragment_218.8500 0.002
loss_121.2500 0.002
loss_48.8500 0.002
fragment_122.0500 0.002
fragment_217.0500 0.002
fragment_361.9500 0.002
loss_116.0500 0.002
fragment_431.3500 0.002
fragment_654.0500 0.002
fragment_399.3500 0.001
fragment_913.3500 0.001
fragment_154.0500 0.001
loss_91.1500 0.001
fragment_56.0500 0.001
loss_159.7500 0.001
fragment_963.3500 0.001

Counts of Classyfire Substituent terms

Term name Count in motif Percentage in motif Percentage in experiment Absolute difference
Hydrocarbon derivative 67 100 100 0
Organooxygen compound 65 97.0 95.3 1.7
Organic nitrogen compound 29 43.3 55.6 12.3
Carbonyl group 24 35.8 44.0 8.2
Organonitrogen compound 23 34.3 54.1 19.8
Organopnictogen compound 20 29.9 45.2 15.4
Benzenoid 12 17.9 18.3 0.4
Aromatic heteropolycyclic compound 8 11.9 9.6 2.3
Azacycle 7 10.4 22.6 12.2
Alcohol 7 10.4 14.7 4.2
Heteroaromatic compound 6 9.0 5.8 3.2
Organoheterocyclic compound 5 7.5 13.3 5.9
Oxacycle 4 6.0 7.9 1.9
Secondary alcohol 3 4.5 7.7 3.2
Aliphatic acyclic compound 1 1.5 2.9 1.4
1-hydroxy-2-unsubstituted benzenoid 1 1.5 1.3 0.2
Oxane 1 1.5 1.9 0.4
Amine 1 1.5 4.4 2.9

Counts of Mass2Motif Features

Two bar plots will appear below this message. The first shows the proportion of the total intensity of these features explained by this Mass2Motif. Red bars show the total intensity (across the whole dataset), blue bars show the proportion explained by the selected Mass2Motif. The second shows the number of times each feature in this Mass2Motif appears in the documents associated with this Mass2Motif.

Fragmentation Spectra Explained by Mass2Motif

The following table lists all fragmentation spectra that are explained by this Mass2Motif at the threshold specified in the experiment option.

Fragmentation spectra Precursor Mass Parent mass Annotation Probability Overlap Score
document_3055 585.2080 585.2080 None 0.953 0.464
document_5907 1123.0430 1123.0430 None 0.910 0.052
document_322 413.2370 413.2370 None 0.774 0.213
document_2020 496.2850 496.2850 None 0.625 0.473
document_503 419.2780 419.2780 None 0.518 0.555
document_3800 655.0350 655.0350 None 0.434 0.021
document_665 422.1530 422.1530 None 0.410 0.464
document_156 405.1970 405.1970 None 0.404 0.051
document_1388 451.3040 451.3040 None 0.400 0.438
document_740 427.2450 427.2450 None 0.389 0.231
document_2939 571.1920 571.1920 None 0.344 0.463
document_477 419.2750 419.2750 None 0.328 0.511
document_485 419.2760 419.2760 None 0.308 0.508
document_2702 551.8160 551.8160 None 0.297 0.465
document_1960 491.1450 491.1450 None 0.286 0.466
document_4159 687.3460 687.3460 None 0.222 0.605
document_2060 497.3590 497.3590 None 0.217 0.034
document_4752 717.3590 717.3590 None 0.189 0.421
document_3649 639.3280 639.3280 None 0.183 0.474
document_492 419.2770 419.2770 None 0.178 0.502
document_3769 650.4200 650.4200 None 0.178 0.421
document_468 419.2760 419.2760 None 0.176 0.504
document_339 413.2460 413.2460 None 0.174 0.148
document_2067 498.2440 498.2440 None 0.156 0.467
document_491 419.2770 419.2770 None 0.148 0.514
document_3656 639.3290 639.3290 None 0.145 0.421
document_494 419.2770 419.2770 None 0.142 0.503
document_832 429.2640 429.2640 None 0.141 0.141
document_3591 636.3590 636.3590 None 0.129 0.464
document_500 419.2770 419.2770 None 0.124 0.502
document_4110 683.3550 683.3550 None 0.120 0.425
document_3251 602.7250 602.7250 None 0.109 0.467
document_497 419.7530 419.7530 None 0.108 0.421
document_449 419.3770 419.3770 None 0.105 0.421
document_3914 669.3380 669.3380 None 0.101 0.424
document_341 413.2560 413.2560 None 0.098 0.144
document_342 413.2580 413.2580 None 0.098 0.141
document_1310 443.3340 443.3340 None 0.096 0.023
document_326 413.2600 413.2600 None 0.092 0.138
document_1277 443.2710 443.2710 None 0.090 0.138
document_340 413.2540 413.2540 None 0.088 0.138
document_3898 667.3230 667.3230 None 0.086 0.421
document_4903 727.3830 727.3830 None 0.083 0.421
document_442 418.9680 418.9680 None 0.079 0.421
document_1067 433.2920 433.2920 None 0.074 0.421
document_338 413.2460 413.2460 None 0.073 0.138
document_3865 663.4520 663.4520 None 0.071 0.141
document_3913 669.3380 669.3380 None 0.069 0.465
document_3128 590.7520 590.7520 None 0.069 0.468
document_4373 699.3490 699.3490 None 0.068 0.421
document_796 429.1790 429.1790 None 0.066 0.049
document_934 430.9120 430.9120 None 0.066 0.032
document_315 413.2370 413.2370 None 0.066 0.559
document_327 413.2390 413.2390 None 0.065 0.138
document_400 415.2870 415.2870 None 0.059 0.138
document_1597 464.2480 464.2480 None 0.056 0.044
document_245 412.1800 412.1800 None 0.055 0.422
document_406 415.3010 415.3010 None 0.055 0.421
document_5416 773.3190 773.3190 None 0.055 0.424
document_1237 443.2630 443.2630 None 0.054 0.138
document_697 425.1980 425.1980 None 0.053 0.421
document_1478 457.3300 457.3300 None 0.053 0.015
document_486 419.2780 419.2780 None 0.052 0.546
document_370 413.2800 413.2800 None 0.051 0.138
document_3033 582.7560 582.7560 None 0.051 0.424
document_1275 443.2700 443.2700 None 0.051 0.138
document_488 419.2760 419.2760 None 0.050 0.544

Fragmentation Spectra Plot

The fragmentation spectra of molecules explained by this Mass2Motif are plotted below. Features (fragments and losses) explained by this Mass2Motif will be coloured red, while parent ion is coloured in blue. Click Next and Previous to cycle through the fragmentation spectra.