Mass2Motif: motif_289

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Mass2Motif Annotation

The following are the full annotation and the short annotation (used for network visualisation) assigned to this Mass2Motif.

Annotation: Streptomyces and one block of species related motif - 207 fragment

Short Annotation: Streptomyces and one block of species related motif - 207 fragment

Mass2Motif Details

The following table shows the fragment and loss features that are explained by this Mass2Motifs and their corresponding probabilities. After thresholding to save the model, the total probability left in this motif is 0.9463187207423519. The column MAGMa Substructure Annotation shows substructures and the counts of MAGMa annotations for documents linked above threshold to this motif in this experiment. Hovering over each MAGMa substructure shows a plot of the substructure.

Feature Probability MAGMA Substructure Annotation
fragment_207.1500 0.455
fragment_279.0500 0.108
fragment_206.0500 0.040
loss_105.0500 0.019
fragment_420.1500 0.018
fragment_254.8500 0.017
loss_158.3500 0.016
fragment_627.3500 0.016
loss_104.5500 0.014
fragment_627.8500 0.014
fragment_280.0500 0.013
loss_91.1500 0.009
fragment_448.1500 0.009
loss_101.0500 0.009
fragment_251.0500 0.009
fragment_855.4500 0.009
fragment_438.1500 0.009
loss_104.0500 0.008
fragment_628.3500 0.008
fragment_113.0500 0.007
fragment_236.1500 0.007
fragment_167.0500 0.006
fragment_208.1500 0.006
fragment_267.0500 0.005
loss_146.1500 0.005
fragment_330.1500 0.004
fragment_418.0500 0.004
loss_121.1500 0.004
fragment_284.1500 0.004
fragment_272.0500 0.004
fragment_349.3500 0.003
fragment_280.1500 0.003
loss_81.2500 0.003
fragment_192.0500 0.003
fragment_956.5500 0.003
fragment_133.6500 0.003
loss_95.0500 0.003
fragment_380.1500 0.003
loss_159.1500 0.003
fragment_378.1500 0.003
loss_161.1500 0.003
fragment_136.0500 0.003
fragment_195.1500 0.002
fragment_883.6500 0.002
fragment_235.1500 0.002
fragment_332.0500 0.002
fragment_453.6500 0.002
loss_85.5500 0.002
fragment_489.1500 0.002
fragment_160.0500 0.002
fragment_856.4500 0.002
fragment_370.1500 0.002
fragment_216.0500 0.002
fragment_762.7500 0.002
loss_195.9500 0.002
loss_184.6500 0.002
fragment_390.0500 0.002
fragment_354.5500 0.002
loss_103.1500 0.002
fragment_310.1500 0.002
fragment_536.4500 0.002
fragment_294.1500 0.002
fragment_178.1500 0.002
loss_123.0500 0.002
fragment_609.3500 0.002
fragment_265.0500 0.001
fragment_172.0500 0.001
fragment_714.8500 0.001
loss_174.0500 0.001
fragment_240.0500 0.001
fragment_368.1500 0.001
fragment_490.7500 0.001
fragment_305.1500 0.001
fragment_767.9500 0.001
fragment_315.3500 0.001
loss_183.8500 0.001

Counts of Classyfire Substituent terms

Term name Count in motif Percentage in motif Percentage in experiment Absolute difference
Hydrocarbon derivative 52 100 100 0
Organooxygen compound 51 98.1 95.3 2.7
Organic nitrogen compound 32 61.5 55.6 5.9
Organonitrogen compound 32 61.5 54.1 7.4
Organopnictogen compound 29 55.8 45.2 10.5
Benzenoid 22 42.3 18.3 24.0
Aromatic heteropolycyclic compound 22 42.3 9.6 32.7
Azacycle 19 36.5 22.6 13.9
Heteroaromatic compound 15 28.8 5.8 23.1
Carbonyl group 13 25 44.0 19.0
Organoheterocyclic compound 9 17.3 13.3 4.0
Alcohol 5 9.6 14.7 5.0
Oxacycle 4 7.7 7.9 0.2
Amine 3 5.8 4.4 1.4
Secondary alcohol 3 5.8 7.7 1.9
Carboxamide group 3 5.8 5.5 0.3
Carboxylic acid ester 1 1.9 1.8 0.1

Counts of Mass2Motif Features

Two bar plots will appear below this message. The first shows the proportion of the total intensity of these features explained by this Mass2Motif. Red bars show the total intensity (across the whole dataset), blue bars show the proportion explained by the selected Mass2Motif. The second shows the number of times each feature in this Mass2Motif appears in the documents associated with this Mass2Motif.

Fragmentation Spectra Explained by Mass2Motif

The following table lists all fragmentation spectra that are explained by this Mass2Motif at the threshold specified in the experiment option.

Fragmentation spectra Precursor Mass Parent mass Annotation Probability Overlap Score
document_2763 557.1780 557.1780 None 0.980 0.122
document_2579 539.2280 539.2280 None 0.783 0.091
document_4969 732.4110 732.4110 None 0.752 0.124
document_2801 561.3940 561.3940 None 0.733 0.137
document_312 413.2220 413.2220 None 0.706 0.059
document_2160 499.2550 499.2550 None 0.672 0.048
document_2939 571.1920 571.1920 None 0.613 0.126
document_3982 677.4710 677.4710 None 0.426 0.468
document_3971 676.3650 676.3650 None 0.365 0.477
document_624 421.2330 421.2330 None 0.358 0.464
document_660 421.2430 421.2430 None 0.342 0.468
document_1555 463.2560 463.2560 None 0.327 0.470
document_636 421.2350 421.2350 None 0.326 0.463
document_649 421.2410 421.2410 None 0.318 0.464
document_3948 673.3790 673.3790 None 0.309 0.459
document_1453 457.2120 457.2120 None 0.298 0.460
document_1063 433.2770 433.2770 None 0.253 0.472
document_1062 433.2810 433.2810 None 0.201 0.469
document_4904 727.3830 727.3830 None 0.182 0.456
document_4546 705.3990 705.3990 None 0.177 0.459
document_4539 705.3980 705.3980 None 0.169 0.463
document_1556 463.2540 463.2540 None 0.160 0.460
document_498 419.2780 419.2780 None 0.158 0.455
document_4484 703.3800 703.3800 None 0.158 0.459
document_4498 704.3280 704.3280 None 0.157 0.150
document_490 419.2760 419.2760 None 0.146 0.455
document_4542 705.4010 705.4010 None 0.145 0.459
document_4400 702.4680 702.4680 None 0.140 0.455
document_1947 489.3670 489.3670 None 0.137 0.455
document_2493 529.2930 529.2930 None 0.130 0.455
document_1260 443.2240 443.2240 None 0.115 0.455
document_73 401.2700 401.2700 None 0.108 0.455
document_595 421.2320 421.2320 None 0.107 0.455
document_454 418.3920 418.3920 None 0.105 0.474
document_160 405.2790 405.2790 None 0.102 0.457
document_1283 443.3210 443.3210 None 0.101 0.455
document_4902 727.3820 727.3820 None 0.098 0.459
document_4499 704.3310 704.3310 None 0.091 0.119
document_1375 450.3800 450.3800 None 0.085 0.121
document_1259 443.2310 443.2310 None 0.082 0.469
document_3528 633.4470 633.4470 None 0.080 0.461
document_1941 489.3660 489.3660 None 0.079 0.457
document_1795 479.2640 479.2640 None 0.073 0.455
document_2921 569.1090 569.1090 None 0.072 0.108
document_5440 780.5440 780.5440 None 0.072 0.039
document_1664 469.1830 469.1830 None 0.069 0.456
document_1009 430.9160 430.9160 None 0.066 0.455
document_5767 913.5130 913.5130 None 0.062 0.454
document_1286 443.8120 443.8120 None 0.061 0.040
document_3250 602.4150 602.4150 None 0.061 0.453
document_3084 587.3040 587.3040 None 0.056 0.112
document_2078 498.3260 498.3260 None 0.052 0.040

Fragmentation Spectra Plot

The fragmentation spectra of molecules explained by this Mass2Motif are plotted below. Features (fragments and losses) explained by this Mass2Motif will be coloured red, while parent ion is coloured in blue. Click Next and Previous to cycle through the fragmentation spectra.